Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | K8M09_18125 | Q46087 | - | 3691357 - 3692853 | 56766.2 |
| hypothetical protein | K8M09_18130 | Not Available | - | 3692973 - 3693233 | 9302.51 |
| nuclear transport factor 2 family protein | K8M09_18135 | Not Available | - | 3693685 - 3694095 | 15711.0 |
| dihydroxy-acid dehydratase | K8M09_18140 | B5ZZ34 | + | 3694379 - 3696121 | 62799.4 |
| methyl-accepting chemotaxis protein | K8M09_18145 | P55439 | - | 3696210 - 3698225 | 72226.7 |
| duf2793 domain-containing protein | K8M09_18150 | Not Available | + | 3698580 - 3699977 | 47459.9 |
| ybak/ebsc family protein | K8M09_18155 | P71000 | + | 3700042 - 3700500 | 15975.2 |
| ncs2 family permease | K8M09_18160 | P31466 | + | 3700732 - 3702024 | 45090.3 |
| ureidoglycolate lyase | K8M09_18165 | Q92TW1 | - | 3702158 - 3702643 | 17733.2 |
| allantoinase puue | K8M09_18170 | O13842 | - | 3702949 - 3704367 | 52632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.