Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | K8M09_17875 | Q5QU46 | + | 3645029 - 3645745 | 25803.4 |
| pepsy domain-containing protein | K8M09_17880 | Not Available | + | 3645885 - 3646202 | 11144.3 |
| vit family protein | K8M09_17885 | Q9P6J2 | + | 3646509 - 3647204 | 23593.7 |
| cadmium-translocating p-type atpase | K8M09_17890 | A0R3A7 | + | 3647207 - 3649186 | 68623.0 |
| hypothetical protein | K8M09_17895 | Not Available | + | 3649503 - 3649904 | 15527.5 |
| duf465 domain-containing protein | K8M09_17900 | Not Available | + | 3649940 - 3650179 | 8915.53 |
| mgtc/sapb family protein | K8M09_17905 | O67688 | - | 3650338 - 3651603 | 43545.0 |
| hamp domain-containing protein | K8M09_17910 | Q9HV31 | - | 3651648 - 3652976 | 47860.0 |
| response regulator transcription factor | K8M09_17915 | Q9HV32 | - | 3652973 - 3653632 | 24094.3 |
| pepsy domain-containing protein | K8M09_17920 | Not Available | + | 3653737 - 3654174 | 16083.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.