Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium-translocating p-type atpase | K8M09_17825 | P0ABB9 | + | 3632262 - 3634841 | 92050.2 |
| metalloregulator arsr/smtb family transcription factor | K8M09_17830 | Q8UAA8 | - | 3635168 - 3635560 | 14897.0 |
| metalloregulator arsr/smtb family transcription factor | K8M09_17835 | P52695 | - | 3635589 - 3635897 | 11384.0 |
| fad-dependent oxidoreductase | K8M09_17840 | B7JBP8 | + | 3636021 - 3637313 | 46577.5 |
| duf2892 domain-containing protein | K8M09_17845 | P73801 | + | 3637353 - 3637556 | 7351.35 |
| efflux rnd transporter periplasmic adaptor subunit | K8M09_17850 | Q44585 | + | 3637655 - 3638635 | 34761.8 |
| efflux rnd transporter permease subunit | K8M09_17855 | P25197 | + | 3638632 - 3641832 | 114978.0 |
| tetr/acrr family transcriptional regulator | K8M09_17860 | Q8DDX7 | + | 3641911 - 3642516 | 22034.8 |
| efflux rnd transporter periplasmic adaptor subunit | K8M09_17865 | A4WCC0 | + | 3642635 - 3643828 | 42027.8 |
| abc transporter permease | K8M09_17870 | P9WG16 | + | 3643825 - 3645027 | 43226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.