Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | K8M09_17725 | Not Available | + | 3610034 - 3610294 | 9413.25 |
| recombinase family protein | K8M09_17730 | Not Available | + | 3610314 - 3611960 | 61934.4 |
| hypothetical protein | K8M09_17735 | Not Available | - | 3611856 - 3612458 | 22227.8 |
| yeca family protein | K8M09_17740 | P55505 | - | 3612388 - 3612951 | 21032.3 |
| is66 family transposase | K8M09_17745 | P55504 | - | 3612948 - 3614522 | 57969.9 |
| is66 family insertion sequence element accessory protein tnpb | K8M09_17750 | P55503 | - | 3614571 - 3614927 | 13019.1 |
| transposase | K8M09_17755 | P55502 | - | 3614924 - 3615394 | 17289.6 |
| recombinase family protein | K8M09_17760 | P17867 | - | 3615375 - 3616922 | 58742.0 |
| recombinase family protein | K8M09_17765 | Not Available | - | 3617002 - 3617841 | 31591.8 |
| hypothetical protein | K8M09_17770 | Not Available | - | 3618066 - 3618836 | 28204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.