Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | K8M09_17675 | Q59750 | - | 3600754 - 3603006 | 84160.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | K8M09_17680 | Q01937 | - | 3603186 - 3604268 | 39107.6 |
| carbohydrate abc transporter permease | K8M09_17685 | Q9KEE9 | - | 3604280 - 3605113 | 30778.9 |
| is481 family transposase | K8M09_17690 | Not Available | - | 3605110 - 3605244 | 4904.01 |
| is21 family transposase | K8M09_17695 | Q46087 | + | 3605341 - 3606837 | 56766.2 |
| is21-like element helper atpase istb | K8M09_17700 | Q45619 | + | 3606834 - 3607592 | 28471.8 |
| ost-hth/lotus domain-containing protein | K8M09_17705 | Not Available | - | 3607837 - 3608706 | 32445.6 |
| alpa family phage regulatory protein | K8M09_17710 | P33997 | + | 3609062 - 3609277 | 8083.7 |
| hypothetical protein | K8M09_17715 | Not Available | + | 3609267 - 3609509 | 8692.89 |
| putative toxin-antitoxin system toxin component, pin family | K8M09_17720 | Not Available | + | 3609618 - 3610037 | 15012.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.