Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| actr/prra/rega family redox response regulator transcription factor | K8M09_17625 | A6UEL7 | - | 3588589 - 3589158 | 20941.0 |
| acts/prrb/regb family redox-sensitive histidine kinase | K8M09_17630 | P0C0Z0 | - | 3589236 - 3590537 | 47248.4 |
| atp-dependent helicase hrpb | K8M09_17635 | P37024 | - | 3590549 - 3593020 | 88802.0 |
| 16s ribosomal rna | Not Available | Not Available | + | 3593689 - 3595173 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3595387 - 3595463 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3595509 - 3595584 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3596149 - 3598945 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3599159 - 3599273 | Not Available |
| Trna-met | Not Available | Not Available | + | 3599375 - 3599451 | Not Available |
| is481 family transposase | K8M09_17670 | P17985 | - | 3599553 - 3600661 | 38766.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.