Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/oxoprolinase family protein | K8M09_17575 | Q5P5G4 | - | 3576751 - 3578757 | 69790.0 |
| hypothetical protein | K8M09_17580 | Not Available | + | 3578882 - 3579421 | 19951.7 |
| cytochrome p450 | K8M09_17585 | Q93VK5 | - | 3579366 - 3580775 | 52907.1 |
| duf1402 family protein | K8M09_17590 | Not Available | - | 3580830 - 3581777 | 34289.5 |
| atp-dependent protease atpase subunit hslu | K8M09_17595 | C3MBC8 | - | 3581960 - 3583264 | 47924.6 |
| gnat family n-acetyltransferase | K8M09_17600 | P19650 | - | 3583279 - 3583773 | 18282.6 |
| atp-dependent protease subunit hslv | K8M09_17605 | C3MBC6 | - | 3583760 - 3584320 | 20204.3 |
| malate synthase g | K8M09_17610 | B9JG75 | + | 3584606 - 3586774 | 78072.3 |
| l,d-transpeptidase | K8M09_17615 | P76193 | - | 3587016 - 3587678 | 23941.7 |
| mmcb family dna repair protein | K8M09_17620 | Not Available | + | 3588058 - 3588588 | 19999.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.