Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | K8M09_17525 | P45388 | + | 3570421 - 3570855 | 16018.3 |
| peptidoglycan-binding protein lysm | K8M09_17530 | P0ADE7 | + | 3570931 - 3571443 | 18002.7 |
| alpha-ketoglutarate-dependent dioxygenase alkb | K8M09_17535 | P0CAT7 | + | 3571443 - 3572066 | 22790.2 |
| type i pantothenate kinase | K8M09_17540 | Q92TB5 | - | 3572083 - 3573078 | 37919.5 |
| phosphoribosyl-atp diphosphatase | K8M09_17545 | B9JG64 | - | 3573078 - 3573398 | 11125.4 |
| imidazole glycerol phosphate synthase subunit hisf | K8M09_17550 | P58799 | - | 3573409 - 3574185 | 27247.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | K8M09_17555 | B9JG66 | - | 3574182 - 3574925 | 25899.2 |
| imidazole glycerol phosphate synthase subunit hish | K8M09_17560 | P58788 | - | 3574927 - 3575568 | 23283.0 |
| duf2628 domain-containing protein | K8M09_17565 | Not Available | - | 3575570 - 3576040 | 16719.2 |
| imidazoleglycerol-phosphate dehydratase hisb | K8M09_17570 | C3MBC5 | - | 3576065 - 3576658 | 21392.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.