Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | K8M09_17475 | Q9A2M1 | - | 3557964 - 3558698 | 26361.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | K8M09_17480 | Q9A2M2 | - | 3558712 - 3560208 | 55084.5 |
| pas-domain containing protein | K8M09_17485 | Q9RQQ9 | - | 3560213 - 3562660 | 89339.0 |
| adenosylhomocysteinase | K8M09_17490 | A6UEJ1 | - | 3562949 - 3564346 | 50865.0 |
| hpr family phosphocarrier protein | K8M09_17495 | P23537 | - | 3564455 - 3564727 | 9325.37 |
| pts sugar transporter subunit iia | K8M09_17500 | P69799 | - | 3564743 - 3565144 | 14200.4 |
| hpr kinase/phosphorylase | K8M09_17505 | A6LTA6 | - | 3565295 - 3565750 | 15461.8 |
| sensor histidine kinase | K8M09_17510 | P72292 | - | 3565747 - 3567525 | 65171.4 |
| response regulator transcription factor | K8M09_17515 | P50351 | - | 3567647 - 3568381 | 27265.8 |
| phosphoenolpyruvate carboxykinase | K8M09_17520 | Q2KE66 | + | 3568696 - 3570306 | 58186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.