Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | K8M09_17425 | Not Available | + | 3544520 - 3545281 | 28469.7 |
| yqae/pmp3 family membrane protein | K8M09_17430 | Not Available | - | 3545285 - 3545479 | 7253.31 |
| phosphoribosylanthranilate isomerase | K8M09_17435 | C3MB98 | + | 3545610 - 3546284 | 23897.5 |
| tryptophan synthase subunit beta | K8M09_17440 | B9JG43 | + | 3546281 - 3547501 | 43835.6 |
| tryptophan synthase subunit alpha | K8M09_17445 | B3PVV3 | + | 3547503 - 3548342 | 29278.5 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | K8M09_17450 | B9JG45 | + | 3548382 - 3549278 | 32947.5 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | K8M09_17455 | P15925 | + | 3549280 - 3550623 | 47553.1 |
| thioredoxin | K8M09_17460 | P00275 | - | 3550815 - 3551135 | 11165.5 |
| double-strand break repair helicase adda | K8M09_17465 | A5D1P3 | - | 3551241 - 3554798 | 128919.0 |
| double-strand break repair protein addb | K8M09_17470 | Q1RIZ9 | - | 3554791 - 3557967 | 114501.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.