Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | K8M09_17175 | O67716 | + | 3487103 - 3488137 | 37559.9 |
| lytic transglycosylase domain-containing protein | K8M09_17180 | P41052 | + | 3488341 - 3489162 | 28666.2 |
| duf1013 domain-containing protein | K8M09_17185 | Not Available | - | 3489287 - 3489988 | 25790.5 |
| acetate--coa ligase | K8M09_17190 | Q8UBV5 | + | 3490218 - 3492173 | 72488.4 |
| duf1674 domain-containing protein | K8M09_17195 | Q9VLU6 | - | 3492250 - 3492447 | 7189.23 |
| zinc metalloprotease htpx | K8M09_17200 | C3MAR8 | + | 3492607 - 3493572 | 34481.0 |
| mfs transporter | K8M09_17205 | Q7MGK4 | + | 3493569 - 3494975 | 50323.2 |
| heparinase ii/iii family protein | K8M09_17210 | A0A0H3C3S1 | + | 3495079 - 3496758 | 62188.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | K8M09_17215 | Q92KX6 | + | 3496892 - 3498502 | 56345.7 |
| mfs transporter | K8M09_17220 | P42306 | - | 3498551 - 3499936 | 48525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.