Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | K8M09_17125 | Not Available | - | 3478887 - 3479198 | 12147.6 |
| metallopeptidase family protein | K8M09_17130 | Not Available | + | 3479576 - 3480010 | 16379.1 |
| duf1737 domain-containing protein | K8M09_17135 | Not Available | - | 3480031 - 3480237 | 7605.09 |
| coa ester lyase | K8M09_17140 | A3PN16 | - | 3480234 - 3481145 | 32176.7 |
| hypothetical protein | K8M09_17145 | Not Available | + | 3481254 - 3481502 | 8773.07 |
| 3-isopropylmalate dehydratase small subunit | K8M09_17150 | Q92LA1 | + | 3481659 - 3482264 | 21924.1 |
| rida family protein | K8M09_17155 | Q8U308 | + | 3482269 - 3482649 | 13786.5 |
| 3-isopropylmalate dehydrogenase | K8M09_17160 | Q92KY8 | + | 3482746 - 3483855 | 39359.6 |
| phosphatase pap2 family protein | K8M09_17165 | Q1MA49 | + | 3483976 - 3484671 | 24812.7 |
| mfs transporter | K8M09_17170 | P40862 | - | 3484729 - 3486618 | 67128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.