Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_16780 | Not Available | - | 3420365 - 3420628 | 9512.52 |
| hypothetical protein | K8M09_17030 | Not Available | + | 3463521 - 3463904 | 14520.9 |
| duf3883 domain-containing protein | K8M09_17035 | Not Available | - | 3463908 - 3464744 | 31421.9 |
| Trna-ser | Not Available | Not Available | + | 3465143 - 3465232 | Not Available |
| is481 family transposase | K8M09_17045 | Q92LB8 | + | 3465560 - 3465871 | 11187.6 |
| 50s ribosomal protein l27 | K8M09_17050 | Q1MA80 | + | 3465960 - 3466229 | 9431.32 |
| gnat family n-acetyltransferase | K8M09_17055 | P94482 | + | 3466357 - 3466989 | 23767.6 |
| gnat family n-acetyltransferase | K8M09_17060 | P05332 | + | 3466986 - 3467576 | 22091.3 |
| endonuclease/exonuclease/phosphatase family protein | K8M09_17065 | Not Available | - | 3467612 - 3468472 | 32132.2 |
| gtpase obge | K8M09_17070 | Q92LB4 | + | 3468558 - 3469568 | 35669.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.