Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | K8M09_16730 | Q61S97 | + | 3404895 - 3406412 | 55797.6 |
| hypothetical protein | K8M09_16735 | Not Available | + | 3406409 - 3407104 | 25361.4 |
| class i sam-dependent methyltransferase | K8M09_16740 | O53532 | + | 3407187 - 3408248 | 38365.5 |
| hypothetical protein | K8M09_16745 | Not Available | - | 3408317 - 3408532 | 7804.01 |
| helix-turn-helix domain-containing protein | K8M09_16750 | P9WKT6 | + | 3409196 - 3409411 | 7957.56 |
| type i restriction-modification system subunit m | K8M09_16755 | Q60297 | + | 3409408 - 3411540 | 79125.1 |
| duf262 domain-containing protein | K8M09_16760 | Q58099 | + | 3411543 - 3413339 | 67717.1 |
| hypothetical protein | K8M09_16765 | Not Available | + | 3413380 - 3414414 | 38310.5 |
| nadar domain-containing protein | K8M09_16770 | P71344 | + | 3414414 - 3416531 | 80087.2 |
| dead/deah box helicase family protein | K8M09_16775 | Q60295 | + | 3416518 - 3420072 | 132385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.