Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | K8M09_16630 | P46562 | - | 3382990 - 3384513 | 53595.2 |
| voc family protein | K8M09_16635 | P76097 | - | 3384644 - 3386041 | 50965.7 |
| lysr family transcriptional regulator | K8M09_16640 | P0A9F8 | + | 3386157 - 3387053 | 33619.4 |
| fad-binding oxidoreductase | K8M09_16645 | Q9Z3S3 | + | 3387172 - 3388455 | 45763.7 |
| formyltetrahydrofolate deformylase | K8M09_16650 | Q46339 | - | 3388509 - 3389393 | 32950.6 |
| hypothetical protein | K8M09_16655 | Not Available | + | 3389700 - 3390887 | 43546.9 |
| succinylglutamate desuccinylase/aspartoacylase family protein | K8M09_16660 | E1V7W0 | - | 3390877 - 3391890 | 35622.7 |
| rida family protein | K8M09_16665 | O30825 | - | 3391893 - 3392237 | 12395.9 |
| alanine racemase | K8M09_16670 | A1B8Z1 | - | 3392264 - 3393577 | 45840.2 |
| amidohydrolase family protein | K8M09_16675 | P55567 | - | 3393570 - 3394505 | 34782.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.