Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmb | K8M09_16480 | P30964 | - | 3338489 - 3339148 | 22474.7 |
| heme abc exporter atp-binding protein ccma | K8M09_16485 | Q92L55 | - | 3339145 - 3339786 | 22483.4 |
| aconitate hydratase acna | K8M09_16490 | P70920 | + | 3340053 - 3342746 | 97204.1 |
| n-acetyltransferase family protein | K8M09_16495 | P31668 | - | 3342797 - 3343348 | 19700.6 |
| pyruvate carboxylase | K8M09_16500 | A0A0H3JRU9 | - | 3343481 - 3346939 | 126094.0 |
| luxr family transcriptional regulator | K8M09_16505 | Q03316 | - | 3347161 - 3347901 | 28277.2 |
| glucan abc transporter atp-binding protein/ permease | K8M09_16510 | P18767 | + | 3348204 - 3349961 | 64082.4 |
| duf3131 domain-containing protein | K8M09_16515 | P20471 | - | 3350050 - 3358536 | 315682.0 |
| hypothetical protein | K8M09_16520 | Not Available | + | 3358535 - 3358741 | 7646.37 |
| methionine synthase | K8M09_16525 | Q9I2Q2 | + | 3358922 - 3362713 | 138261.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.