Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | K8M09_16380 | P15026 | + | 3317718 - 3318530 | 29807.5 |
| bmp family protein | K8M09_16385 | Q2YKI6 | + | 3318782 - 3319807 | 36789.6 |
| abc transporter atp-binding protein | K8M09_16390 | O05253 | + | 3319932 - 3321467 | 54793.2 |
| abc transporter permease | K8M09_16395 | D4GPW2 | + | 3321457 - 3322506 | 36392.2 |
| abc transporter permease | K8M09_16400 | D4GPW1 | + | 3322508 - 3323449 | 33205.3 |
| amidohydrolase family protein | K8M09_16405 | P25524 | + | 3323446 - 3324738 | 47009.1 |
| galactose mutarotase | K8M09_16410 | Q66HG4 | - | 3324744 - 3325760 | 36454.7 |
| gnat family n-acetyltransferase | K8M09_16415 | P39979 | - | 3325856 - 3326308 | 17146.3 |
| homoserine o-succinyltransferase | K8M09_16420 | B9JDI5 | - | 3326312 - 3327235 | 35208.8 |
| duf2794 domain-containing protein | K8M09_16425 | Not Available | - | 3327420 - 3327794 | 14479.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.