Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | K8M09_16330 | P69680 | - | 3308992 - 3310353 | 46862.7 |
| p-ii family nitrogen regulator | K8M09_16335 | O54053 | - | 3310384 - 3310722 | 12132.8 |
| acyl-coa thioesterase ii | K8M09_16340 | P0AGG3 | - | 3310941 - 3311825 | 32863.1 |
| ubiquinone biosynthesis hydroxylase | K8M09_16345 | Q2RMZ4 | + | 3311936 - 3313156 | 44053.9 |
| trm112 family protein | K8M09_16350 | C3M9Z9 | - | 3313153 - 3313341 | 6888.54 |
| lon peptidase substrate-binding domain-containing protein | K8M09_16355 | P36774 | - | 3313352 - 3314032 | 24828.7 |
| thioredoxin | K8M09_16360 | Q9CM49 | - | 3314159 - 3315121 | 33688.1 |
| prolyl-trna synthetase associated domain-containing protein | K8M09_16365 | A6NEY8 | - | 3315180 - 3315689 | 18382.0 |
| Trna-gly | Not Available | Not Available | + | 3315907 - 3315981 | Not Available |
| is21 family transposase | K8M09_16375 | Q46087 | + | 3316202 - 3317728 | 58599.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.