Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | K8M09_16280 | A6UE47 | + | 3298202 - 3298720 | 18787.3 |
| transporter substrate-binding domain-containing protein | K8M09_16285 | P42199 | + | 3298869 - 3299666 | 28830.3 |
| amino acid abc transporter permease | K8M09_16290 | P54953 | + | 3299676 - 3300491 | 29322.9 |
| 3-isopropylmalate dehydratase large subunit | K8M09_16295 | C3M9V0 | + | 3300734 - 3302143 | 50863.6 |
| aldo/keto reductase | K8M09_16300 | A0QV10 | - | 3302211 - 3303041 | 30682.3 |
| response regulator transcription factor | K8M09_16305 | P94504 | + | 3303319 - 3304002 | 25554.6 |
| crp/fnr family transcriptional regulator | K8M09_16310 | Q2H0D3 | + | 3304023 - 3304478 | 16491.0 |
| exodeoxyribonuclease iii | K8M09_16315 | P09030 | - | 3304482 - 3305288 | 30480.5 |
| outer membrane lipoprotein carrier protein lola | K8M09_16320 | A6V4H3 | - | 3305344 - 3306003 | 24034.1 |
| dna translocase ftsk | K8M09_16325 | Q92L89 | - | 3306116 - 3308785 | 95589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.