Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septation protein a | K8M09_16230 | Q92L49 | - | 3288759 - 3289409 | 24284.4 |
| signal recognition particle-docking protein ftsy | K8M09_16235 | A9CHH2 | - | 3289406 - 3290953 | 54589.7 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | K8M09_16240 | Q9ZDB6 | - | 3290966 - 3292255 | 46995.6 |
| diaminopimelate epimerase | K8M09_16245 | B5ZTH4 | - | 3292252 - 3293151 | 31834.8 |
| signal recognition particle protein | K8M09_16250 | P0AGD9 | + | 3293465 - 3295006 | 53913.0 |
| chorismate mutase | K8M09_16255 | Q57696 | + | 3295017 - 3295337 | 12081.4 |
| 30s ribosomal protein s16 | K8M09_16260 | B9JCL9 | + | 3295369 - 3295734 | 13415.0 |
| ribosome maturation factor rimm | K8M09_16265 | A6UE44 | + | 3295902 - 3296477 | 20722.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | K8M09_16270 | Q8UBZ7 | + | 3296479 - 3297174 | 25421.5 |
| sulfite exporter taue/safe family protein | K8M09_16275 | P29942 | - | 3297156 - 3297902 | 25487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.