Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l32 | K8M09_16130 | B9JDZ7 | - | 3268010 - 3268195 | 6896.36 |
| glutathione s-transferase family protein | K8M09_16135 | A1XBB7 | - | 3268342 - 3268989 | 23984.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | K8M09_16140 | Q92L23 | - | 3269061 - 3269843 | 29476.0 |
| polyprenyl synthetase family protein | K8M09_16145 | P22939 | + | 3269944 - 3270861 | 32467.0 |
| histidinol-phosphate transaminase | K8M09_16150 | Q92L21 | + | 3270866 - 3271921 | 38655.4 |
| lyse family translocator | K8M09_16155 | Q8Z3B3 | + | 3272037 - 3272681 | 22762.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | K8M09_16160 | C3MAL6 | - | 3272682 - 3273935 | 44732.9 |
| mfs transporter | K8M09_16165 | Q7CH99 | - | 3274063 - 3275256 | 41748.6 |
| deor/glpr family dna-binding transcription regulator | K8M09_16170 | P0ACL0 | - | 3275346 - 3276110 | 26078.5 |
| bax inhibitor-1/ycca family protein | K8M09_16175 | Q9ZE15 | - | 3276267 - 3277010 | 26624.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.