Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | K8M09_16080 | Q9ZDG1 | - | 3259316 - 3260194 | 30321.2 |
| abc transporter substrate-binding protein | K8M09_16085 | Q9ZDG2 | - | 3260318 - 3261271 | 32394.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | K8M09_16090 | Q92L68 | - | 3261380 - 3262618 | 46094.9 |
| duf1176 domain-containing protein | K8M09_16095 | Not Available | - | 3262841 - 3263344 | 17972.6 |
| duf1232 domain-containing protein | K8M09_16100 | Not Available | - | 3263650 - 3264039 | 14401.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | K8M09_16105 | B9JCJ2 | - | 3264111 - 3264419 | 11470.5 |
| beta-ketoacyl-acp reductase | K8M09_16110 | P23238 | - | 3264497 - 3265222 | 25246.2 |
| acetyl-coa c-acetyltransferase | K8M09_16115 | P07097 | - | 3265310 - 3266491 | 40631.9 |
| polyhydroxyalkanoate synthesis repressor phar | K8M09_16120 | P45373 | + | 3266785 - 3267363 | 21966.3 |
| hypothetical protein | K8M09_16125 | Not Available | - | 3267446 - 3267853 | 14503.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.