Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | K8M09_16030 | Not Available | - | 3249668 - 3250735 | 39198.1 |
| response regulator transcription factor | K8M09_16035 | Q8XBS3 | + | 3250813 - 3251487 | 24112.2 |
| sensor histidine kinase n-terminal domain-containing protein | K8M09_16040 | Q9HV31 | + | 3251484 - 3252872 | 49090.3 |
| lyse family translocator | K8M09_16045 | A4WB82 | - | 3252973 - 3253614 | 22516.4 |
| marr family transcriptional regulator | K8M09_16050 | P40676 | + | 3253780 - 3254265 | 17745.7 |
| multidrug effflux mfs transporter | K8M09_16055 | P96709 | + | 3254277 - 3255482 | 42043.8 |
| argininosuccinate synthase | K8M09_16060 | Q92L73 | - | 3255536 - 3256759 | 45110.0 |
| sdr family nad(p)-dependent oxidoreductase | K8M09_16065 | Q9X248 | + | 3256944 - 3257795 | 30795.9 |
| lyse family translocator | K8M09_16070 | P0AG36 | + | 3257879 - 3258520 | 22487.2 |
| abc transporter atp-binding protein | K8M09_16075 | Q2JB14 | - | 3258522 - 3259316 | 28245.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.