Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inorganic diphosphatase | K8M09_15980 | Q8UC37 | - | 3238541 - 3239074 | 19860.0 |
| hypothetical protein | K8M09_15985 | Not Available | + | 3239210 - 3239815 | 21910.7 |
| gnat family n-acetyltransferase | K8M09_15990 | O32075 | - | 3239819 - 3240325 | 18905.9 |
| translational gtpase typa | K8M09_15995 | P0A3B2 | - | 3240531 - 3242357 | 66793.5 |
| m3 family metallopeptidase | K8M09_16000 | P24171 | - | 3242504 - 3244564 | 75985.0 |
| duf475 domain-containing protein | K8M09_16005 | Not Available | + | 3244943 - 3246061 | 40198.8 |
| hypothetical protein | K8M09_16010 | Not Available | - | 3246169 - 3246333 | 5844.98 |
| tripartite tricarboxylate transporter permease | K8M09_16015 | P70795 | - | 3246487 - 3248004 | 52463.2 |
| tripartite tricarboxylate transporter tctb family protein | K8M09_16020 | Not Available | - | 3248014 - 3248502 | 17748.1 |
| tripartite tricarboxylate transporter substrate binding protein | K8M09_16025 | O34439 | - | 3248499 - 3249443 | 31941.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.