Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | K8M09_15930 | P44887 | - | 3229688 - 3229981 | 10514.5 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | K8M09_15935 | Q9R9L6 | - | 3230016 - 3231002 | 33015.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | K8M09_15940 | Q92LH8 | - | 3230999 - 3232093 | 38464.2 |
| hydroxymethylbilane synthase | K8M09_15945 | Q8UC46 | + | 3232167 - 3233096 | 33165.8 |
| uroporphyrinogen-iii synthase | K8M09_15950 | Not Available | + | 3233098 - 3233811 | 25113.4 |
| hypothetical protein | K8M09_15955 | Q0V4H8 | + | 3233910 - 3235106 | 41061.8 |
| heme biosynthesis protein hemy | K8M09_15960 | Q3BKD5 | + | 3235118 - 3236716 | 58055.2 |
| terb family tellurite resistance protein | K8M09_15965 | Not Available | + | 3236840 - 3237328 | 18017.2 |
| glutamine amidotransferase | K8M09_15970 | P40194 | + | 3237331 - 3238047 | 26591.0 |
| yggt family protein | K8M09_15975 | Q8U530 | + | 3238147 - 3238440 | 10774.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.