Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | K8M09_15880 | C3M9U0 | - | 3221409 - 3222371 | 33584.2 |
| cell division protein zape | K8M09_15885 | Q32PX9 | - | 3222549 - 3223730 | 44208.0 |
| protease inhibitor inh/omp19 family protein | K8M09_15890 | Q926C0 | - | 3223768 - 3224301 | 18206.5 |
| succinate dehydrogenase iron-sulfur subunit | K8M09_15895 | Q59662 | - | 3224446 - 3225225 | 29452.5 |
| succinate dehydrogenase flavoprotein subunit | K8M09_15900 | Q59661 | - | 3225244 - 3227085 | 66630.1 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | K8M09_15905 | Q1RHB6 | - | 3227092 - 3227472 | 13568.2 |
| succinate dehydrogenase, cytochrome b556 subunit | K8M09_15910 | Q59659 | - | 3227483 - 3227875 | 14855.5 |
| hypothetical protein | K8M09_15915 | Not Available | + | 3228176 - 3228607 | 15589.5 |
| methyltransferase | K8M09_15920 | Q4V7W8 | - | 3228588 - 3229244 | 23481.8 |
| eve domain-containing protein | K8M09_15925 | Q91YJ3 | - | 3229250 - 3229681 | 16409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.