Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit gamma | K8M09_15780 | A6UDM2 | - | 3200281 - 3201150 | 31386.2 |
| f0f1 atp synthase subunit alpha | K8M09_15785 | C3M9S3 | - | 3201252 - 3202781 | 54631.9 |
| f0f1 atp synthase subunit delta | K8M09_15790 | Q2K3G7 | - | 3202781 - 3203347 | 19447.5 |
| duf4345 domain-containing protein | K8M09_15795 | Not Available | - | 3203610 - 3203993 | 13298.6 |
| primosomal protein n' | K8M09_15800 | P05445 | - | 3204098 - 3206302 | 80527.9 |
| aaa family atpase | K8M09_15805 | Not Available | - | 3206361 - 3207491 | 41781.0 |
| tyrosine recombinase xerc | K8M09_15810 | Q92LK1 | + | 3207640 - 3208575 | 33810.8 |
| trab/gumn family protein | K8M09_15815 | F6PTN1 | + | 3208640 - 3209716 | 38329.7 |
| duf2867 domain-containing protein | K8M09_15820 | Not Available | - | 3209700 - 3210194 | 18083.3 |
| type ii toxin-antitoxin system rele/pare family toxin | K8M09_15825 | Not Available | - | 3210268 - 3210567 | 11157.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.