Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | K8M09_15730 | Not Available | + | 3192257 - 3192430 | 6011.4 |
| methyltransferase domain-containing protein | K8M09_15735 | O80543 | - | 3192431 - 3193303 | 31539.2 |
| comf family protein | K8M09_15740 | Q8ZLI8 | + | 3193366 - 3194157 | 28093.4 |
| glutaredoxin 3 | K8M09_15745 | Q9HU55 | + | 3194193 - 3194447 | 9263.02 |
| carbon-nitrogen hydrolase family protein | K8M09_15750 | P0DP68 | + | 3194458 - 3195318 | 30387.4 |
| duf1178 family protein | K8M09_15755 | Not Available | + | 3195315 - 3195743 | 15895.8 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | K8M09_15760 | C3MHQ9 | - | 3195744 - 3196493 | 27299.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | K8M09_15765 | P55357 | - | 3196626 - 3198053 | 51515.3 |
| f0f1 atp synthase subunit epsilon | K8M09_15770 | Q2K3H1 | - | 3198268 - 3198675 | 14687.6 |
| f0f1 atp synthase subunit beta | K8M09_15775 | Q92LK8 | - | 3198740 - 3200254 | 53232.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.