Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | K8M09_15680 | Not Available | + | 3180471 - 3180734 | 8972.56 |
| amp-binding protein | K8M09_15685 | P39062 | + | 3180804 - 3182447 | 59676.0 |
| gnat family n-acetyltransferase | K8M09_15690 | Not Available | - | 3182614 - 3183885 | 47331.9 |
| lipopolysaccharide biosynthesis protein | K8M09_15695 | Q58467 | - | 3183875 - 3185290 | 50559.2 |
| preprotein translocase subunit seca | K8M09_15700 | C3MHS0 | - | 3185434 - 3188148 | 101298.0 |
| peptidylprolyl isomerase | K8M09_15705 | Q81GN0 | + | 3188386 - 3189285 | 32615.8 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | K8M09_15710 | Q92MJ1 | + | 3189341 - 3190579 | 42891.2 |
| gnat family n-acetyltransferase | K8M09_15715 | O34376 | + | 3190622 - 3191380 | 27445.8 |
| 8-oxo-dgtp diphosphatase mutt | K8M09_15720 | P77788 | + | 3191377 - 3191799 | 15700.2 |
| hypothetical protein | K8M09_15725 | Not Available | + | 3191913 - 3192233 | 11278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.