Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is5-like element iskpn12 family transposase | K8M09_15580 | Q08082 | + | 3160712 - 3161472 | 29030.4 |
| is110 family transposase | K8M09_15585 | Q45968 | + | 3161587 - 3162618 | 37191.0 |
| hypothetical protein | K8M09_15590 | Not Available | + | 3162695 - 3162832 | 4827.79 |
| glycosyltransferase | K8M09_15595 | P26388 | + | 3162942 - 3163364 | 15593.8 |
| sugar transferase | K8M09_15600 | B3FN88 | + | 3163503 - 3164714 | 44609.0 |
| glycosyltransferase family 4 protein | K8M09_15605 | P32057 | - | 3164765 - 3165919 | 42550.5 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | K8M09_15610 | Q58899 | - | 3166259 - 3167413 | 42864.5 |
| nad-dependent epimerase/dehydratase family protein | K8M09_15615 | Q9XC60 | - | 3167418 - 3168557 | 41019.8 |
| polysaccharide biosynthesis protein | K8M09_15620 | A8EZA9 | - | 3168539 - 3169567 | 38061.9 |
| is481 family transposase | K8M09_15625 | Not Available | - | 3169783 - 3170472 | 24853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.