Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_15530 | Not Available | + | 3152312 - 3152524 | 8118.84 |
| is481 family transposase | K8M09_15535 | P22996 | - | 3152656 - 3152907 | 8988.85 |
| is3 family transposase | K8M09_15540 | P37007 | + | 3152998 - 3154349 | 52383.3 |
| is481 family transposase | K8M09_15545 | P50358 | + | 3154775 - 3155005 | 9092.07 |
| is3 family transposase | K8M09_15550 | P0A3L3 | + | 3155109 - 3156322 | 45713.0 |
| is481 family transposase | K8M09_15555 | Not Available | + | 3156365 - 3156848 | 17523.7 |
| o-antigen ligase family protein | K8M09_15560 | Not Available | - | 3156909 - 3158135 | 44895.1 |
| glycosyltransferase family 25 protein | K8M09_15565 | Q7Q021 | - | 3158209 - 3158943 | 27282.7 |
| transposase | K8M09_15570 | Q08082 | - | 3159070 - 3159354 | 10836.2 |
| is3 family transposase | K8M09_15575 | P24577 | - | 3159379 - 3160568 | 44761.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.