Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | K8M09_15430 | Q92MH1 | - | 3135741 - 3137144 | 51253.0 |
| tlpa family protein disulfide reductase | K8M09_15435 | P43221 | + | 3137180 - 3137854 | 23368.3 |
| sulfate/molybdate abc transporter atp-binding protein | K8M09_15440 | Q8UA73 | - | 3137859 - 3138881 | 37208.7 |
| sulfate abc transporter permease subunit cysw | K8M09_15445 | P27370 | - | 3138878 - 3139774 | 31310.8 |
| sulfate abc transporter permease subunit cyst | K8M09_15450 | P41032 | - | 3139777 - 3140598 | 29103.4 |
| thiosulfate abc transporter substrate-binding protein cysp | K8M09_15455 | P16700 | - | 3140666 - 3141649 | 35912.4 |
| 3-hydroxybutyryl-coa dehydrogenase | K8M09_15460 | Q45223 | - | 3141787 - 3142659 | 31253.0 |
| electron transfer flavoprotein subunit alpha/fixb family protein | K8M09_15465 | P53573 | - | 3142806 - 3143735 | 31482.6 |
| electron transfer flavoprotein subunit beta/fixa family protein | K8M09_15470 | P53575 | - | 3143758 - 3144507 | 26504.3 |
| rhomboid family intramembrane serine protease | K8M09_15475 | Q9FZ81 | - | 3144691 - 3145476 | 28170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.