Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | K8M09_15380 | Q9LLY4 | - | 3126173 - 3126961 | 30180.5 |
| ydcf family protein | K8M09_15385 | Not Available | - | 3127037 - 3127741 | 25514.9 |
| abc transporter permease | K8M09_15390 | Q9R9Y4 | - | 3127812 - 3128819 | 36015.9 |
| cell division atp-binding protein ftse | K8M09_15395 | A5U7B7 | - | 3128812 - 3129471 | 24917.7 |
| hypothetical protein | K8M09_15400 | Not Available | + | 3129709 - 3130386 | 24014.1 |
| hypoxanthine phosphoribosyltransferase | K8M09_15405 | P37472 | + | 3130433 - 3130978 | 19725.7 |
| response regulator | K8M09_15410 | Q2YIF7 | + | 3131067 - 3131426 | 12747.4 |
| tigr02302 family protein | K8M09_15415 | Not Available | - | 3131470 - 3134061 | 94190.2 |
| diaminopimelate decarboxylase | K8M09_15420 | Q9Z661 | - | 3134169 - 3135437 | 45658.7 |
| lipoprotein | K8M09_15425 | Not Available | - | 3135451 - 3135633 | 6637.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.