Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| esterase-like activity of phytase family protein | K8M09_15330 | Not Available | + | 3117855 - 3118841 | 36071.6 |
| vut family protein | K8M09_15335 | P37619 | - | 3118880 - 3119518 | 23068.8 |
| 50s ribosomal protein l28 | K8M09_15340 | Q92MF4 | - | 3119687 - 3119977 | 10534.8 |
| duf3108 domain-containing protein | K8M09_15345 | Not Available | + | 3120269 - 3121012 | 26606.0 |
| eama family transporter | K8M09_15350 | D7A5Q8 | + | 3121049 - 3121930 | 31005.6 |
| hydroxyacylglutathione hydrolase | K8M09_15355 | Q92MF8 | - | 3121934 - 3122698 | 27662.9 |
| class i sam-dependent methyltransferase | K8M09_15360 | P05447 | + | 3122790 - 3123539 | 27908.0 |
| prephenate/arogenate dehydrogenase family protein | K8M09_15365 | Q04983 | + | 3123599 - 3124528 | 33610.1 |
| duf2125 domain-containing protein | K8M09_15370 | Not Available | - | 3124529 - 3125536 | 34737.4 |
| gamma-glutamylcyclotransferase | K8M09_15375 | P39163 | + | 3125621 - 3126172 | 20650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.