Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | K8M09_15280 | C3MHX3 | - | 3108956 - 3109909 | 34661.3 |
| site-specific tyrosine recombinase xerd | K8M09_15285 | Q92ME3 | - | 3109986 - 3110933 | 34494.5 |
| hypothetical protein | K8M09_15290 | Not Available | - | 3110930 - 3111079 | 5499.88 |
| shikimate kinase | K8M09_15295 | Q92ME6 | + | 3111210 - 3111800 | 21785.4 |
| 3-dehydroquinate synthase | K8M09_15300 | Q92ME7 | + | 3111803 - 3112930 | 39810.9 |
| is481 family transposase | K8M09_15305 | Q57017 | + | 3113080 - 3113820 | 27541.0 |
| bola family transcriptional regulator | K8M09_15310 | P29943 | - | 3113821 - 3114102 | 10055.0 |
| j domain-containing protein | K8M09_15315 | P29944 | + | 3114216 - 3114848 | 23675.9 |
| cobaltochelatase subunit cobs | K8M09_15320 | P29933 | + | 3114907 - 3115905 | 36946.1 |
| cobaltochelatase subunit cobt | K8M09_15325 | P29934 | + | 3115922 - 3117823 | 70178.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.