Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | K8M09_15230 | Q0K8S4 | + | 3101286 - 3102002 | 25346.1 |
| cap-gly domain protein | K8M09_15235 | Not Available | + | 3102037 - 3102420 | 14565.6 |
| amino acid transporter | K8M09_15240 | Not Available | - | 3102434 - 3102658 | 7895.82 |
| Trna-arg | Not Available | Not Available | + | 3102804 - 3102880 | Not Available |
| hypothetical protein | K8M09_15250 | Not Available | + | 3103041 - 3103304 | 9608.45 |
| m20 family metallopeptidase | K8M09_15255 | P45493 | - | 3103371 - 3104531 | 41062.2 |
| d-alanyl-d-alanine carboxypeptidase | K8M09_15260 | P08506 | + | 3104700 - 3105782 | 38445.9 |
| gtp-binding protein | K8M09_15265 | P24203 | + | 3105794 - 3106939 | 41626.1 |
| sulfurtransferase tusa family protein | K8M09_15270 | A4STF8 | - | 3107004 - 3107252 | 8982.85 |
| l,d-transpeptidase family protein | K8M09_15275 | P0AAA0 | - | 3107249 - 3108751 | 55213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.