Shinella zoogloeoides 1-16M

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella zoogloeoides
Strain1-16M

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella zoogloeoides 1-16M

Accession NumberCP086610.1

Gene Summary

Adenine Count

713258 bp

Thymine Count

704761 bp

Guanine Count

1279043 bp

Cytosine Count

1294829 bp

Genome Length

3991891 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
deor/glpr family dna-binding transcription regulatorK8M09_15130Q51391-3074622 - 307539227739.2
sdr family oxidoreductaseK8M09_15135P55575+3075529 - 307629927021.4
oxidoreductaseK8M09_15140Q5LS56-3076312 - 307730734955.2
lysr family transcriptional regulatorK8M09_15145P27111+3077401 - 307829433056.1
formate dehydrogenase subunit gammaK8M09_15150Q9I0J8+3078477 - 307895617378.0
nadh-quinone oxidoreductase subunit nuofK8M09_15155Q46507+3078953 - 308050954615.9
duf4287 domain-containing proteinK8M09_15160Not Available+3080506 - 30807217757.26
formate dehydrogenase subunit alphaK8M09_15165Q795Y4+3080776 - 3083655105579.0
formate dehydrogenase accessory sulfurtransferase fdhdK8M09_15170Q8UC79+3083722 - 308449827007.3
formate dehydrogenase subunit deltaK8M09_15175Not Available+3084508 - 30847569010.81

Displaying genes 3081 – 3090 of 4728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites