Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | K8M09_15080 | B9JT13 | - | 3061861 - 3062943 | 40080.5 |
| phosphoenolpyruvate--protein phosphotransferase | K8M09_15085 | P37177 | - | 3062965 - 3065232 | 83379.2 |
| aspartate kinase | K8M09_15090 | Q88EI9 | - | 3065319 - 3066593 | 45317.6 |
| abc transporter substrate-binding protein | K8M09_15095 | Q7LYW7 | - | 3066813 - 3068534 | 63911.0 |
| duf2160 domain-containing protein | K8M09_15100 | Not Available | - | 3068609 - 3069028 | 15326.2 |
| carbohydrate abc transporter permease | K8M09_15105 | P9WG00 | - | 3069028 - 3069903 | 32090.5 |
| sugar abc transporter permease | K8M09_15110 | O51924 | - | 3069915 - 3070781 | 32303.3 |
| abc transporter atp-binding protein | K8M09_15115 | Q2K4V4 | - | 3070784 - 3071854 | 39576.6 |
| abc transporter atp-binding protein | K8M09_15120 | Q8Z245 | - | 3071865 - 3072947 | 38772.8 |
| glycerol-3-phosphate dehydrogenase | K8M09_15125 | Q2YIQ2 | - | 3072990 - 3074507 | 56283.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.