Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | + | 3048742 - 3048818 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3048920 - 3049034 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3049248 - 3052044 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3052609 - 3052684 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3052730 - 3052806 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 3053020 - 3054504 | Not Available |
| m23 family metallopeptidase | K8M09_15060 | P44693 | + | 3055136 - 3057088 | 70554.9 |
| atp-dependent chaperone clpb | K8M09_15065 | Q92MK7 | - | 3057160 - 3059766 | 95871.0 |
| duf4167 domain-containing protein | K8M09_15070 | Not Available | - | 3060022 - 3060663 | 23237.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | K8M09_15075 | A9CG70 | - | 3060995 - 3061864 | 30573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.