Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxyltransferase domain-containing protein | K8M09_14980 | P60495 | - | 3037753 - 3038628 | 32902.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | K8M09_14985 | Q8X9B6 | - | 3038628 - 3040013 | 49177.3 |
| biotin carboxyl carrier domain-containing protein | K8M09_14990 | Q5XAE6 | - | 3040010 - 3040252 | 8538.15 |
| 5-oxoprolinase subunit pxpa | K8M09_14995 | Q9I626 | - | 3040290 - 3041066 | 28271.8 |
| lysr family transcriptional regulator | K8M09_15000 | P27111 | + | 3041323 - 3042225 | 33634.9 |
| hydantoinase/oxoprolinase family protein | K8M09_15005 | Q01262 | - | 3042245 - 3044326 | 74585.0 |
| hydantoinase b/oxoprolinase family protein | K8M09_15010 | Q01263 | - | 3044339 - 3045088 | 26356.4 |
| is21-like element helper atpase istb | K8M09_15015 | Q45619 | - | 3045171 - 3045929 | 28471.8 |
| is21 family transposase | K8M09_15020 | Q46087 | - | 3045926 - 3047422 | 56766.2 |
| is481 family transposase | K8M09_15025 | Not Available | + | 3047545 - 3048473 | 33114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.