Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | K8M09_14880 | P0AGI3 | - | 3016708 - 3017658 | 33003.1 |
| abc transporter permease | K8M09_14885 | P0AGI3 | - | 3017661 - 3018632 | 33448.1 |
| sugar abc transporter atp-binding protein | K8M09_14890 | Q87ZE0 | - | 3018649 - 3020142 | 52942.2 |
| abc transporter substrate-binding protein | K8M09_14895 | A0QYB5 | - | 3020201 - 3021277 | 39024.0 |
| sgnh/gdsl hydrolase family protein | K8M09_14900 | Not Available | + | 3021456 - 3022193 | 26637.8 |
| rok family protein | K8M09_14905 | P55455 | + | 3022247 - 3023320 | 38605.6 |
| amidase | K8M09_14910 | Q38M35 | - | 3023345 - 3024700 | 47203.9 |
| extracellular solute-binding protein | K8M09_14915 | Not Available | - | 3024703 - 3025935 | 45856.3 |
| gtp-binding protein | K8M09_14920 | P24203 | - | 3025935 - 3027011 | 38529.2 |
| hypothetical protein | K8M09_14925 | Not Available | - | 3027004 - 3027336 | 11926.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.