Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | K8M09_14830 | Q57083 | + | 3005953 - 3006858 | 33774.5 |
| antibiotic biosynthesis monooxygenase | K8M09_14835 | A6TEB3 | - | 3006873 - 3007178 | 11781.0 |
| autoinducer-2 kinase | K8M09_14840 | A1JJ57 | - | 3007216 - 3008778 | 55583.9 |
| sugar-binding transcriptional regulator | K8M09_14845 | A6TEB9 | - | 3008783 - 3009730 | 34268.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | K8M09_14850 | B1IRU7 | + | 3009971 - 3011473 | 53632.8 |
| autoinducer 2 abc transporter permease lsrc | K8M09_14855 | Q2PBM2 | + | 3011466 - 3012497 | 35538.4 |
| autoinducer 2 import system permease lsrd | K8M09_14860 | B1XEA3 | + | 3012494 - 3013507 | 34312.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | K8M09_14865 | Q8XAY9 | + | 3013510 - 3014541 | 36483.3 |
| class ii aldolase | K8M09_14870 | P40747 | + | 3014606 - 3015859 | 45061.5 |
| sgnh/gdsl hydrolase family protein | K8M09_14875 | Not Available | - | 3016021 - 3016677 | 23360.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.