Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | K8M09_14780 | P05406 | - | 2997291 - 2998031 | 26239.5 |
| gntr family transcriptional regulator | K8M09_14785 | P76114 | - | 2998106 - 2998786 | 25195.4 |
| hypothetical protein | K8M09_14790 | Not Available | - | 2998779 - 2999048 | 9676.87 |
| phosphotransferase | K8M09_14795 | Q5U5V2 | + | 2999047 - 3000039 | 35733.9 |
| aspartate aminotransferase family protein | K8M09_14800 | Q8BWU8 | + | 3000042 - 3001358 | 47175.5 |
| duf3617 family protein | K8M09_14805 | Not Available | + | 3001529 - 3002080 | 19311.5 |
| hypothetical protein | K8M09_14810 | Not Available | + | 3002305 - 3002577 | 9768.88 |
| duf899 domain-containing protein | K8M09_14815 | Not Available | + | 3002580 - 3003272 | 26395.0 |
| m81 family metallopeptidase | K8M09_14820 | Q93CA6 | - | 3003301 - 3004788 | 52028.6 |
| transporter substrate-binding domain-containing protein | K8M09_14825 | G3XD47 | - | 3004944 - 3005777 | 30204.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.