Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | K8M09_14730 | P55652 | + | 2983472 - 2985409 | 67579.8 |
| hypothetical protein | K8M09_14735 | Not Available | + | 2986203 - 2986466 | 9409.53 |
| methyl-accepting chemotaxis protein | K8M09_14740 | P55652 | - | 2986580 - 2988514 | 67669.9 |
| cyclic diguanylate phosphodiesterase | K8M09_14745 | P75995 | - | 2989439 - 2990995 | 55824.3 |
| arac family transcriptional regulator | K8M09_14750 | P35319 | - | 2991116 - 2992024 | 32140.1 |
| sdr family oxidoreductase | K8M09_14755 | P37959 | + | 2992121 - 2992870 | 26183.5 |
| abc transporter permease | K8M09_14760 | P0AFL2 | - | 2992899 - 2993681 | 27727.1 |
| abc transporter permease | K8M09_14765 | P31135 | - | 2993684 - 2994862 | 42391.6 |
| abc transporter atp-binding protein | K8M09_14770 | Q1AS06 | - | 2994859 - 2995926 | 38829.8 |
| abc transporter substrate-binding protein | K8M09_14775 | Q9I6R6 | - | 2996047 - 2997099 | 38006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.