Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abzj_00895 family protein | K8M09_14680 | Not Available | + | 2973381 - 2973812 | 15007.9 |
| l,d-transpeptidase family protein | K8M09_14685 | Not Available | - | 2973850 - 2974362 | 18551.7 |
| hypothetical protein | K8M09_14690 | Not Available | - | 2974485 - 2974907 | 14536.2 |
| helix-turn-helix domain-containing protein | K8M09_14695 | Not Available | - | 2974895 - 2975383 | 17876.8 |
| diaminopimelate decarboxylase | K8M09_14700 | Q9JXM2 | - | 2975530 - 2976867 | 46557.8 |
| lysr family transcriptional regulator | K8M09_14705 | P03030 | + | 2976998 - 2977921 | 34109.3 |
| eal domain-containing protein | K8M09_14710 | Q9HYT3 | - | 2977972 - 2979948 | 72486.6 |
| hypothetical protein | K8M09_14715 | Not Available | - | 2979945 - 2980430 | 17113.3 |
| eal domain-containing protein | K8M09_14720 | Q9ABX9 | - | 2980453 - 2982570 | 76977.4 |
| hypothetical protein | K8M09_14725 | Not Available | + | 2983090 - 2983287 | 7438.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.