Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | K8M09_14630 | P33950 | - | 2960123 - 2961685 | 57649.9 |
| amidohydrolase family protein | K8M09_14635 | Q8PUQ3 | + | 2961855 - 2963219 | 48873.4 |
| amidohydrolase family protein | K8M09_14640 | O52063 | + | 2963243 - 2964439 | 43096.2 |
| trap transporter substrate-binding protein | K8M09_14645 | Q315G1 | + | 2964605 - 2965705 | 39578.7 |
| eal domain-containing protein | K8M09_14650 | Q9ABX9 | + | 2965737 - 2968433 | 96971.7 |
| meta domain-containing protein | K8M09_14655 | Not Available | - | 2968449 - 2969150 | 24448.2 |
| hypothetical protein | K8M09_14660 | Not Available | - | 2969235 - 2970083 | 30817.2 |
| whg domain-containing protein | K8M09_14665 | Not Available | - | 2970119 - 2970736 | 21955.6 |
| hypothetical protein | K8M09_14670 | Not Available | + | 2970911 - 2972011 | 40307.2 |
| hd-gyp domain-containing protein | K8M09_14675 | Q9HWS0 | + | 2972197 - 2973159 | 35106.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.