Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease subunit cyst | K8M09_14580 | P16701 | - | 2947729 - 2948592 | 30629.1 |
| sulfate abc transporter substrate-binding protein | K8M09_14585 | P0AG78 | - | 2948598 - 2949623 | 37051.7 |
| fad/nad(p)-binding protein | K8M09_14590 | Not Available | - | 2949849 - 2951162 | 47323.8 |
| phytanoyl-coa dioxygenase family protein | K8M09_14595 | Not Available | - | 2951301 - 2952236 | 36054.9 |
| arac family transcriptional regulator | K8M09_14600 | Q1C0W2 | + | 2952364 - 2953215 | 31820.2 |
| amidohydrolase family protein | K8M09_14605 | Q24UA2 | - | 2953420 - 2954898 | 53471.2 |
| amidohydrolase family protein | K8M09_14610 | Q8PUQ3 | - | 2954932 - 2956374 | 51929.9 |
| abc transporter atp-binding protein | K8M09_14615 | Q6D3A9 | - | 2956387 - 2958105 | 61265.3 |
| abc transporter permease | K8M09_14620 | P51000 | - | 2958107 - 2959003 | 31876.5 |
| abc transporter permease | K8M09_14625 | P77308 | - | 2959003 - 2959968 | 35195.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.