Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfur carrier protein this | K8M09_14480 | Not Available | + | 2930833 - 2931030 | 7018.21 |
| thiazole synthase | K8M09_14485 | O34293 | + | 2931032 - 2931805 | 27587.8 |
| thiamine phosphate synthase | K8M09_14490 | O34294 | + | 2931802 - 2932407 | 22395.2 |
| amidohydrolase | K8M09_14495 | P55567 | - | 2932409 - 2933254 | 30616.8 |
| iclr family transcriptional regulator | K8M09_14500 | A1B8Z4 | - | 2933251 - 2934045 | 28395.1 |
| l-fuconate dehydratase | K8M09_14505 | Q8P3K2 | + | 2934180 - 2935457 | 47331.9 |
| molybdopterin-binding protein | K8M09_14510 | P45183 | + | 2935530 - 2935742 | 7177.75 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | K8M09_14515 | O52278 | - | 2935739 - 2936260 | 19315.3 |
| homoprotocatechuate degradation operon regulator hpar | K8M09_14520 | P62573 | - | 2936354 - 2936854 | 18426.1 |
| fumarylacetoacetate hydrolase family protein | K8M09_14525 | O58377 | + | 2936979 - 2937692 | 25311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.