Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | K8M09_14430 | P39456 | + | 2921316 - 2922077 | 27478.3 |
| helix-turn-helix domain-containing protein | K8M09_14435 | A6U5H5 | + | 2922213 - 2922659 | 15884.8 |
| hypothetical protein | K8M09_14440 | Q9Z3Q0 | + | 2922666 - 2924474 | 66952.0 |
| hypothetical protein | K8M09_14445 | Not Available | + | 2924769 - 2924984 | 7850.57 |
| deda family protein | K8M09_14450 | P0ADR0 | + | 2925161 - 2925598 | 15556.3 |
| sigma-70 family rna polymerase sigma factor | K8M09_14455 | A0QTP2 | + | 2925653 - 2926198 | 20212.0 |
| anti-sigma factor | K8M09_14460 | Not Available | + | 2926185 - 2926958 | 28473.7 |
| bax inhibitor-1/ycca family protein | K8M09_14465 | Q9ZE15 | + | 2926989 - 2927705 | 26169.4 |
| phosphomethylpyrimidine synthase thic | K8M09_14470 | Q2K206 | + | 2928048 - 2929859 | 66462.3 |
| glycine oxidase thio | K8M09_14475 | O34292 | + | 2929862 - 2930836 | 35407.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.