Shinella zoogloeoides 1-16M

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella zoogloeoides
Strain1-16M

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella zoogloeoides 1-16M

Accession NumberCP086610.1

Gene Summary

Adenine Count

713258 bp

Thymine Count

704761 bp

Guanine Count

1279043 bp

Cytosine Count

1294829 bp

Genome Length

3991891 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
aldehyde dehydrogenase family proteinK8M09_14330Q56YU0+2898059 - 289956452797.6
laci family transcriptional regulatorK8M09_14335Q9Z3R4-2899612 - 290072440703.9
abc transporter substrate-binding proteinK8M09_14340Q92KZ7+2900997 - 290224744617.9
sugar abc transporter permeaseK8M09_14345O58968+2902421 - 290330232672.7
carbohydrate abc transporter permeaseK8M09_14350O58967+2903299 - 290418032484.3
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcK8M09_14355Q63Q62+2904186 - 290530140008.6
gmc family oxidoreductaseK8M09_14360Q2MF66+2905309 - 290681755156.4
3-ketoacyl-acp reductaseK8M09_14365Q5HPW0+2906814 - 290759326372.0
gmc family oxidoreductase n-terminal domain-containing proteinK8M09_14370Q47944+2907617 - 290927260029.4
dabb family proteinK8M09_14375Not Available+2909282 - 290959911567.7

Displaying genes 2921 – 2930 of 4728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites